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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931547.1_cds_XP_016478332.1_69978
CDS Infomation

[gene=LOC107799707] [db_xref=GeneID:107799707] [protein=cysteine proteinase RD19a-like] [protein_id=XP_016478332.1] [location=join(11610..12077,12178..12297,13434..13680,14012..14081,14139..14343)] [gbkey=CDS]
Sequence

ATGGCTCTTCGTTTCTCTTTAATTTTCCTATTTTCTCTTTTTTTAACGACGTCGTTTTTG
GTGTCCGCTAACGGCTACATTAACGGCGGTGACGACGGCATATTAATCCGTCAAGTCATA
GGCAACGACGACGATCACTTGCTAAACGTCGATCATCACTTCACGATTTTCAAGAAGAGG
TTCGGAAAAACCTACGCGTCCGATGAGGAGCATCATTACAGATTATCGGTGTTCAAGGCT
AACTTGCGCCGCGCAATGCGCCACCAGAAGCTTGATCCCTCCGCGGTTCACGGTGTGACT
CAGTTTTCCGATTTGACTCCGGCCGAGTTCCGCCGGAAGTTTCTAGGAGTTAACCGCCGG
CTCCGGCTTCCTTCTGATGCCAATAAAGCTCCTGTTCTTCCTACTGAGGATCTCCCTTCA
GATTTCGATTGGAGAGATCACGGTGCCGTCACGCCAGTGAAGAATCAGGGTTCATGCGGG
TCATGCTGGTCATTTAGTACCACTGGTGCGTTAGAAGGTGCCAACTATCTTTCTACAGGG
AAGCTTGTAAGCCTCAGCGAGCAACAACTTGTGGACTGTGATCACGAGTGTGATCCAGAA
GAAAAAGGTTCATGTGACGCAGGGTGCAATGGTGGCCTAATGAATAGTGCCTTTGAATAC
ACTCTCAAAGCTGGTGGACTTATGCGAGAAGGAGATTATCCATACACTGGCACCGATCGT
GGAACCTGCAAATTTGACAACACCAAGGTTGCTGCTAAAGTTGCTAACTTTAGCGTTGTC
TCCCTTGACGAAGAACAAATCGCTGCTAATCTTGTCAAGAATGGTCCTCTCGCTGTGGCG
ATCAATGCAGTGTTCATGCAGACATACGTTGGCGGAGTTTCCTGCCCATATATATGCTCT
AAGAGGTTGGATCATGGTGTCTTATTAGTGGGTTATGGTACTGGCTTTTCTCCCATTCGA
ATGAAAGAGAAACCATACTGGATCATCAAGAACTCATGGGGAAAGAAATGGGGTGAAAAC
GGATACTACAAAATCTGTAGAGGACGCAATGTTTGCGGAGTGGATTCAATGGTTTCAACA
GTTGCAGCTGTTAGTACCAGCTCACACTGA

Peptide Sequence

PEP ID

XP_016478332.1
PEP Infomation

PREDICTED: cysteine proteinase RD19a-like [Nicotiana tabacum]
Sequence

MALRFSLIFLFSLFLTTSFLVSANGYINGGDDGILIRQVIGNDDDHLLNVDHHFTIFKKR
FGKTYASDEEHHYRLSVFKANLRRAMRHQKLDPSAVHGVTQFSDLTPAEFRRKFLGVNRR
LRLPSDANKAPVLPTEDLPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGANYLSTG
KLVSLSEQQLVDCDHECDPEEKGSCDAGCNGGLMNSAFEYTLKAGGLMREGDYPYTGTDR
GTCKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICS
KRLDHGVLLVGYGTGFSPIRMKEKPYWIIKNSWGKKWGENGYYKICRGRNVCGVDSMVST
VAAVSTSSH

Transcript Sequence

Gene sequence data has not been registered.